Enable separation of long- and short-range of Ewald sum in python
This commit is contained in:
parent
5fdbb362a3
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8abe7e3357
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@ -20,6 +20,12 @@ class BesselType(enum.IntEnum):
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HANKEL_PLUS = QPMS_HANKEL_PLUS
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HANKEL_PLUS = QPMS_HANKEL_PLUS
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HANKEL_MINUS = QPMS_HANKEL_MINUS
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HANKEL_MINUS = QPMS_HANKEL_MINUS
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class EwaldPart(enum.IntEnum):
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LONG_RANGE = QPMS_EWALD_LONG_RANGE
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SHORT_RANGE = QPMS_EWALD_SHORT_RANGE
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FULL = QPMS_EWALD_FULL
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ZEROTERM = QPMS_EWALD_0TERM
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class PointGroupClass(enum.IntEnum):
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class PointGroupClass(enum.IntEnum):
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CN = QPMS_PGS_CN
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CN = QPMS_PGS_CN
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S2N = QPMS_PGS_S2N
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S2N = QPMS_PGS_S2N
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@ -36,14 +36,6 @@
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#include "lattices.h"
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#include "lattices.h"
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typedef enum {
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QPMS_EWALD_LONG_RANGE = 1,
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QPMS_EWALD_SHORT_RANGE = 2,
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QPMS_EWALD_0TERM = 4,
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QPMS_EWALD_FULL = QPMS_EWALD_LONG_RANGE | QPMS_EWALD_SHORT_RANGE | QPMS_EWALD_0TERM,
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} qpms_ewald_part;
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/// Use this handler to ignore underflows of incomplete gamma.
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/// Use this handler to ignore underflows of incomplete gamma.
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gsl_error_handler_t IgnoreUnderflowsGSLErrorHandler;
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gsl_error_handler_t IgnoreUnderflowsGSLErrorHandler;
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@ -11,7 +11,7 @@ from .qpms_cdefs cimport *
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from .cyquaternions cimport IRot3, CQuat
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from .cyquaternions cimport IRot3, CQuat
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from .cybspec cimport BaseSpec
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from .cybspec cimport BaseSpec
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from .cycommon cimport make_c_string
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from .cycommon cimport make_c_string
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from .cycommon import string_c2py, PointGroupClass, BesselType
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from .cycommon import string_c2py, PointGroupClass, BesselType, EwaldPart
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from .cytmatrices cimport CTMatrix, TMatrixFunction, TMatrixGenerator, TMatrixInterpolator
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from .cytmatrices cimport CTMatrix, TMatrixFunction, TMatrixGenerator, TMatrixInterpolator
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from .cymaterials cimport EpsMuGenerator, EpsMu
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from .cymaterials cimport EpsMuGenerator, EpsMu
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from libc.stdlib cimport malloc, free, calloc
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from libc.stdlib cimport malloc, free, calloc
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@ -1026,7 +1026,8 @@ cdef class _ScatteringSystemAtOmegaK:
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self.sswk.eta = eta
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self.sswk.eta = eta
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@boundscheck(False)
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@boundscheck(False)
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def scattered_E(self, scatcoeffvector_full, evalpos, btyp=QPMS_HANKEL_PLUS):
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def scattered_E(self, scatcoeffvector_full, evalpos, btyp=QPMS_HANKEL_PLUS,
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ewaldparts = EwaldPart.FULL):
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"""Evaluate electric field for a given excitation coefficient vector (periodic system)
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"""Evaluate electric field for a given excitation coefficient vector (periodic system)
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Parameters
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Parameters
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@ -1045,6 +1046,7 @@ cdef class _ScatteringSystemAtOmegaK:
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if(btyp != QPMS_HANKEL_PLUS):
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if(btyp != QPMS_HANKEL_PLUS):
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raise NotImplementedError("Only first kind Bessel function-based fields are supported")
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raise NotImplementedError("Only first kind Bessel function-based fields are supported")
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cdef qpms_bessel_t btyp_c = BesselType(btyp)
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cdef qpms_bessel_t btyp_c = BesselType(btyp)
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cdef qpms_ewald_part ewaldparts_c = EwaldPart(ewaldparts)
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evalpos = np.array(evalpos, dtype=float, copy=False)
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evalpos = np.array(evalpos, dtype=float, copy=False)
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if evalpos.shape[-1] != 3:
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if evalpos.shape[-1] != 3:
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raise ValueError("Last dimension of evalpos has to be 3")
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raise ValueError("Last dimension of evalpos has to be 3")
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@ -1060,14 +1062,14 @@ cdef class _ScatteringSystemAtOmegaK:
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pos.x = evalpos_a[i,0]
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pos.x = evalpos_a[i,0]
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pos.y = evalpos_a[i,1]
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pos.y = evalpos_a[i,1]
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pos.z = evalpos_a[i,2]
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pos.z = evalpos_a[i,2]
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res = qpms_scatsyswk_scattered_E(&self.sswk, btyp_c, &scv_view[0], pos)
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res = qpms_scatsyswk_scattered_E_e(&self.sswk, btyp_c, &scv_view[0], pos, ewaldparts_c)
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results[i,0] = res.x
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results[i,0] = res.x
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results[i,1] = res.y
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results[i,1] = res.y
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results[i,2] = res.z
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results[i,2] = res.z
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return results.reshape(evalpos.shape)
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return results.reshape(evalpos.shape)
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@boundscheck(False)
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@boundscheck(False)
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def scattered_field_basis(self, evalpos, btyp=QPMS_HANKEL_PLUS):
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def scattered_field_basis(self, evalpos, btyp=QPMS_HANKEL_PLUS, ewaldparts=EwaldPart.FULL):
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# TODO examples
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# TODO examples
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"""Evaluate scattered field "basis" (periodic system)
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"""Evaluate scattered field "basis" (periodic system)
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@ -1089,6 +1091,7 @@ cdef class _ScatteringSystemAtOmegaK:
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if(btyp != QPMS_HANKEL_PLUS):
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if(btyp != QPMS_HANKEL_PLUS):
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raise NotImplementedError("Only first kind Bessel function-based fields are supported")
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raise NotImplementedError("Only first kind Bessel function-based fields are supported")
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cdef qpms_bessel_t btyp_c = BesselType(btyp)
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cdef qpms_bessel_t btyp_c = BesselType(btyp)
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cdef qpms_ewald_part ewaldparts_c = EwaldPart(ewaldparts)
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cdef Py_ssize_t fecv_size = self.fecv_size
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cdef Py_ssize_t fecv_size = self.fecv_size
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evalpos = np.array(evalpos, dtype=float, copy=False)
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evalpos = np.array(evalpos, dtype=float, copy=False)
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if evalpos.shape[-1] != 3:
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if evalpos.shape[-1] != 3:
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@ -1104,7 +1107,7 @@ cdef class _ScatteringSystemAtOmegaK:
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pos.x = evalpos_a[i,0]
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pos.x = evalpos_a[i,0]
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pos.y = evalpos_a[i,1]
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pos.y = evalpos_a[i,1]
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pos.z = evalpos_a[i,2]
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pos.z = evalpos_a[i,2]
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qpms_scatsyswk_scattered_field_basis(res, &self.sswk, btyp_c, pos)
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qpms_scatsyswk_scattered_field_basis_e(res, &self.sswk, btyp_c, pos, ewaldparts_c)
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for j in range(fecv_size):
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for j in range(fecv_size):
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results[i,j,0] = res[j].x
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results[i,j,0] = res[j].x
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results[i,j,1] = res[j].y
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results[i,j,1] = res[j].y
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@ -150,6 +150,11 @@ cdef extern from "qpms_types.h":
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cdouble mu
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cdouble mu
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ctypedef enum qpms_coord_system_t:
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ctypedef enum qpms_coord_system_t:
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pass
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pass
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ctypedef enum qpms_ewald_part:
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QPMS_EWALD_LONG_RANGE
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QPMS_EWALD_SHORT_RANGE
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QPMS_EWALD_FULL
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QPMS_EWALD_0TERM
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# maybe more if needed
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# maybe more if needed
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cdef extern from "qpms_error.h":
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cdef extern from "qpms_error.h":
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@ -708,6 +713,8 @@ cdef extern from "scatsystem.h":
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const cdouble *f_excitation_vector_full, cart3_t where) nogil
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const cdouble *f_excitation_vector_full, cart3_t where) nogil
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ccart3_t qpms_scatsyswk_scattered_E(const qpms_scatsys_at_omega_k_t *sswk, qpms_bessel_t btyp,
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ccart3_t qpms_scatsyswk_scattered_E(const qpms_scatsys_at_omega_k_t *sswk, qpms_bessel_t btyp,
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const cdouble *f_excitation_vector_full, cart3_t where) nogil
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const cdouble *f_excitation_vector_full, cart3_t where) nogil
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ccart3_t qpms_scatsyswk_scattered_E_e(const qpms_scatsys_at_omega_k_t *sswk, qpms_bessel_t btyp,
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const cdouble *f_excitation_vector_full, cart3_t where, qpms_ewald_part parts) nogil
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qpms_errno_t qpms_scatsys_scattered_field_basis(ccart3_t *target, const qpms_scatsys_t *ss,
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qpms_errno_t qpms_scatsys_scattered_field_basis(ccart3_t *target, const qpms_scatsys_t *ss,
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qpms_bessel_t btyp, cdouble wavenumber, cart3_t where) nogil
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qpms_bessel_t btyp, cdouble wavenumber, cart3_t where) nogil
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qpms_errno_t qpms_scatsysw_scattered_field_basis(ccart3_t *target, const qpms_scatsys_at_omega_t *ssw,
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qpms_errno_t qpms_scatsysw_scattered_field_basis(ccart3_t *target, const qpms_scatsys_at_omega_t *ssw,
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@ -718,6 +725,8 @@ cdef extern from "scatsystem.h":
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qpms_ss_pi_t pi, qpms_bessel_t btyp, cart3_t where) nogil
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qpms_ss_pi_t pi, qpms_bessel_t btyp, cart3_t where) nogil
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qpms_errno_t qpms_scatsyswk_scattered_field_basis(ccart3_t *target, const qpms_scatsys_at_omega_k_t *sswk,
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qpms_errno_t qpms_scatsyswk_scattered_field_basis(ccart3_t *target, const qpms_scatsys_at_omega_k_t *sswk,
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qpms_bessel_t btyp, cart3_t where) nogil
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qpms_bessel_t btyp, cart3_t where) nogil
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qpms_errno_t qpms_scatsyswk_scattered_field_basis_e(ccart3_t *target, const qpms_scatsys_at_omega_k_t *sswk,
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qpms_bessel_t btyp, cart3_t where, qpms_ewald_part parts) nogil
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double qpms_ss_adjusted_eta(const qpms_scatsys_t *ss, cdouble wavenumber, const double *wavevector) nogil
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double qpms_ss_adjusted_eta(const qpms_scatsys_t *ss, cdouble wavenumber, const double *wavevector) nogil
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@ -726,12 +735,6 @@ cdef extern from "ewald.h":
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cdouble val
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cdouble val
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double err
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double err
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ctypedef enum qpms_ewald_part:
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QPMS_EWALD_LONG_RANGE
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QPMS_EWALD_SHORT_RANGE
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QPMS_EWALD_FULL
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QPMS_EWALD_0TERM
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struct qpms_ewald3_constants_t:
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struct qpms_ewald3_constants_t:
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qpms_l_t lMax
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qpms_l_t lMax
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qpms_y_t nelem_sc
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qpms_y_t nelem_sc
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@ -426,5 +426,12 @@ typedef struct qpms_epsmu_t {
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struct qpms_tolerance_spec_t; // See tolerances.h
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struct qpms_tolerance_spec_t; // See tolerances.h
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typedef enum {
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QPMS_EWALD_LONG_RANGE = 1,
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QPMS_EWALD_SHORT_RANGE = 2,
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QPMS_EWALD_0TERM = 4,
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QPMS_EWALD_FULL = QPMS_EWALD_LONG_RANGE | QPMS_EWALD_SHORT_RANGE | QPMS_EWALD_0TERM,
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} qpms_ewald_part;
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#define lmcheck(l,m) assert((l) >= 1 && abs(m) <= (l))
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#define lmcheck(l,m) assert((l) >= 1 && abs(m) <= (l))
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#endif // QPMS_TYPES
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#endif // QPMS_TYPES
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@ -2179,10 +2179,11 @@ ccart3_t qpms_scatsysw_scattered_E__alt(const qpms_scatsys_at_omega_t *ssw,
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// For periodic lattices, we use directly the "alternative" implementation,
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// For periodic lattices, we use directly the "alternative" implementation,
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// using translation operator and regular dipole waves at zero
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// using translation operator and regular dipole waves at zero
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ccart3_t qpms_scatsyswk_scattered_E(const qpms_scatsys_at_omega_k_t *sswk,
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ccart3_t qpms_scatsyswk_scattered_E_e(const qpms_scatsys_at_omega_k_t *sswk,
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qpms_bessel_t btyp,
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qpms_bessel_t btyp,
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const complex double *cvf,
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const complex double *cvf,
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const cart3_t where
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const cart3_t where,
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const qpms_ewald_part parts
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) {
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) {
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QPMS_UNTESTED;
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QPMS_UNTESTED;
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if (btyp != QPMS_HANKEL_PLUS)
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if (btyp != QPMS_HANKEL_PLUS)
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@ -2214,13 +2215,13 @@ ccart3_t qpms_scatsyswk_scattered_E(const qpms_scatsys_at_omega_k_t *sswk,
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const double maxR = sqrt(ss->per.unitcell_volume) * 64;
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const double maxR = sqrt(ss->per.unitcell_volume) * 64;
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const double maxK = 2048 * 2 * M_PI / maxR;
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const double maxK = 2048 * 2 * M_PI / maxR;
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QPMS_ENSURE_SUCCESS(qpms_trans_calculator_get_trans_array_e32(
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QPMS_ENSURE_SUCCESS(qpms_trans_calculator_get_trans_array_e32_e(
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ss->c, s, NULL,
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ss->c, s, NULL,
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&dipspec, 1, bspec, dipspec.n,
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&dipspec, 1, bspec, dipspec.n,
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sswk->eta, sswk->ssw->wavenumber,
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sswk->eta, sswk->ssw->wavenumber,
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cart3xy2cart2(ss->per.lattice_basis[0]), cart3xy2cart2(ss->per.lattice_basis[1]),
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cart3xy2cart2(ss->per.lattice_basis[0]), cart3xy2cart2(ss->per.lattice_basis[1]),
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cart2_from_double_array(sswk->k), cart3_substract(where, particle_pos) /*CHECKSIGN*/,
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cart2_from_double_array(sswk->k), cart3_substract(where, particle_pos) /*CHECKSIGN*/,
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maxR, maxK));
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maxR, maxK, parts));
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for(size_t i = 0; i < bspec->n; ++i)
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for(size_t i = 0; i < bspec->n; ++i)
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for(size_t j = 0; j < dipspec.n; ++j){
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for(size_t j = 0; j < dipspec.n; ++j){
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@ -2234,11 +2235,17 @@ ccart3_t qpms_scatsyswk_scattered_E(const qpms_scatsys_at_omega_k_t *sswk,
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return res;
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return res;
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}
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}
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qpms_errno_t qpms_scatsyswk_scattered_field_basis(
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ccart3_t qpms_scatsyswk_scattered_E(const qpms_scatsys_at_omega_k_t *sswk,
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qpms_bessel_t btyp, const complex double *cvf, const cart3_t where) {
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return qpms_scatsyswk_scattered_E_e(sswk, btyp, cvf, where, QPMS_EWALD_FULL);
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}
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qpms_errno_t qpms_scatsyswk_scattered_field_basis_e(
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ccart3_t *target,
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ccart3_t *target,
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const qpms_scatsys_at_omega_k_t *sswk,
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const qpms_scatsys_at_omega_k_t *sswk,
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const qpms_bessel_t btyp,
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const qpms_bessel_t btyp,
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const cart3_t where
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const cart3_t where,
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const qpms_ewald_part parts
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) {
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) {
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QPMS_UNTESTED;
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QPMS_UNTESTED;
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if (btyp != QPMS_HANKEL_PLUS)
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if (btyp != QPMS_HANKEL_PLUS)
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@ -2272,13 +2279,13 @@ qpms_errno_t qpms_scatsyswk_scattered_field_basis(
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const double maxR = sqrt(ss->per.unitcell_volume) * 64;
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const double maxR = sqrt(ss->per.unitcell_volume) * 64;
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const double maxK = 2048 * 2 * M_PI / maxR;
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const double maxK = 2048 * 2 * M_PI / maxR;
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QPMS_ENSURE_SUCCESS(qpms_trans_calculator_get_trans_array_e32(
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QPMS_ENSURE_SUCCESS(qpms_trans_calculator_get_trans_array_e32_e(
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ss->c, s, NULL,
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ss->c, s, NULL,
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&dipspec, 1, bspec, dipspec.n,
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&dipspec, 1, bspec, dipspec.n,
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sswk->eta, sswk->ssw->wavenumber,
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sswk->eta, sswk->ssw->wavenumber,
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cart3xy2cart2(ss->per.lattice_basis[0]), cart3xy2cart2(ss->per.lattice_basis[1]),
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cart3xy2cart2(ss->per.lattice_basis[0]), cart3xy2cart2(ss->per.lattice_basis[1]),
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cart2_from_double_array(sswk->k), cart3_substract(where, particle_pos) /*CHECKSIGN*/,
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cart2_from_double_array(sswk->k), cart3_substract(where, particle_pos) /*CHECKSIGN*/,
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maxR, maxK));
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maxR, maxK, parts));
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for(size_t i = 0; i < bspec->n; ++i)
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for(size_t i = 0; i < bspec->n; ++i)
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for(size_t j = 0; j < dipspec.n; ++j){
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for(size_t j = 0; j < dipspec.n; ++j){
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@ -2294,6 +2301,13 @@ qpms_errno_t qpms_scatsyswk_scattered_field_basis(
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return QPMS_SUCCESS;
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return QPMS_SUCCESS;
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}
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}
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qpms_errno_t qpms_scatsyswk_scattered_field_basis(
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ccart3_t *target, const qpms_scatsys_at_omega_k_t *sswk,
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const qpms_bessel_t btyp, const cart3_t where) {
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return qpms_scatsyswk_scattered_field_basis_e(
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target, sswk, btyp, where, QPMS_EWALD_FULL);
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}
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#if 0
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#if 0
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ccart3_t qpms_scatsys_scattered_E_irrep(const qpms_scatsys_t *ss,
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ccart3_t qpms_scatsys_scattered_E_irrep(const qpms_scatsys_t *ss,
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qpms_iri_t iri, const complex double *cvr, cart3_t where) {
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qpms_iri_t iri, const complex double *cvr, cart3_t where) {
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||||||
|
|
|
@ -892,6 +892,14 @@ ccart3_t qpms_scatsyswk_scattered_E(
|
||||||
cart3_t evalpoint ///< A point \f$ \vect r \f$, at which the field is evaluated.
|
cart3_t evalpoint ///< A point \f$ \vect r \f$, at which the field is evaluated.
|
||||||
);
|
);
|
||||||
|
|
||||||
|
ccart3_t qpms_scatsyswk_scattered_E_e(
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||||||
|
const qpms_scatsys_at_omega_k_t *sswk,
|
||||||
|
qpms_bessel_t typ, ///< Bessel function kind to use (only QPMS_HANKEL_PLUS is currently supported).
|
||||||
|
const complex double *scatcoeff_full, ///< Full vector of the scattered field coefficients \f$ \wckcout \f$.
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||||||
|
cart3_t evalpoint, ///< A point \f$ \vect r \f$, at which the field is evaluated.
|
||||||
|
qpms_ewald_part parts
|
||||||
|
);
|
||||||
|
|
||||||
/// Evaluates "scattered" field basis functions in a periodic system.
|
/// Evaluates "scattered" field basis functions in a periodic system.
|
||||||
/**
|
/**
|
||||||
*
|
*
|
||||||
|
@ -904,6 +912,14 @@ qpms_errno_t qpms_scatsyswk_scattered_field_basis(
|
||||||
cart3_t evalpoint ///< A point \f$ \vect r \f$, at which the basis is evaluated.
|
cart3_t evalpoint ///< A point \f$ \vect r \f$, at which the basis is evaluated.
|
||||||
);
|
);
|
||||||
|
|
||||||
|
qpms_errno_t qpms_scatsyswk_scattered_field_basis_e(
|
||||||
|
ccart3_t *target, ///< Target array of size sswk->ssw->ss->fecv_size
|
||||||
|
const qpms_scatsys_at_omega_k_t *sswk,
|
||||||
|
qpms_bessel_t typ, ///< Bessel function kind to use (only QPMS_HANKEL_PLUS is currently supponted).
|
||||||
|
cart3_t evalpoint, ///< A point \f$ \vect r \f$, at which the basis is evaluated.
|
||||||
|
qpms_ewald_part parts
|
||||||
|
);
|
||||||
|
|
||||||
|
|
||||||
/// Adjusted Ewadl parameter to avoid high-frequency breakdown.
|
/// Adjusted Ewadl parameter to avoid high-frequency breakdown.
|
||||||
// TODO DOC
|
// TODO DOC
|
||||||
|
|
Loading…
Reference in New Issue