Commit Graph

63 Commits

Author SHA1 Message Date
Marek Nečada 788a990a29 Revert scatsystem cython parallelisation.
It didn't work correctly on my laptop.
This must be reviewed later, as the waiting is annoying.
2022-06-22 12:33:48 +03:00
Marek Nečada 3a34effe34 Don't import qpms_p in __init__, remove scipy from install dependencies 2022-06-07 06:10:24 +03:00
Marek Nečada 80ee8b0d53 setup.py improvements
- resolve numpy header location using numpy.get_include()
- a hack to install cython, numpy before calling setup()
  (needed for cythonize() and get_include()) if necessary
- use named lists to reduce repetitions
- remove gslcblas from linker dependencies
- remove some old, commented out stuff
2021-08-08 08:02:06 +03:00
Marek Nečada 38a4dbfcd7 Set compiler/linker options to make cython parallelisation actually work. 2020-07-03 15:10:15 +03:00
Marek Nečada 626ffd77cd Wrappers for testing z != 0 lattice sum related special functions.
Former-commit-id: a6be46f81850b1c01c72ea96c141c92a98f6ace8
2020-05-22 15:44:20 +03:00
Marek Nečada 5a9219a4f6 Expose single vswf functions to cython.
Former-commit-id: 7fd1183cdab2d6f60b446879a875dab4d673da73
2019-08-14 11:04:42 +03:00
Marek Nečada 2e037550b5 Build libqpms as shared library.
Former-commit-id: 218d30a8502e5ea5814e4d8e119b750ca93d257f
2019-08-12 16:33:54 +03:00
Marek Nečada 1aa64248fc Split away CTMatrix, TMatrixInterpolator
Former-commit-id: ca92a0938f12fda858794b203e196366f2466a6f
2019-08-10 09:55:50 +03:00
Marek Nečada 6ea386d759 Split away MaterialInterpolator
Former-commit-id: a882ac5e1a6fa38137fa9059fda53c671534128b
2019-08-10 09:40:59 +03:00
Marek Nečada 5d1f05984e Split trans_calculator to a separate extension
Former-commit-id: eb6a55246e0fab6078906e317e31611f385a677d
2019-08-10 08:57:24 +03:00
Marek Nečada 0504f98bc0 Make the splitted setup work
Former-commit-id: 9c8a7e4d1131c40ceb27a4b1a9c54d80c319394b
2019-08-10 08:08:16 +03:00
Marek Nečada 371a8a5f7c Start splitting qpms_c.pyx
Former-commit-id: bb2e68dc4cb7f85769ddaf5533298ab1f0e84f5b
2019-08-09 21:54:13 +03:00
Marek Nečada 8158cef41c Move material properties-related stuff to materials.[ch]
Former-commit-id: 0039b167488c5aca55ea1912e43ec3ab8b289c1e
2019-08-08 15:33:06 +03:00
Marek Nečada 1b63d75153 PointGroup cython class, fix many bugs (quaternion ambiguity).
Former-commit-id: 16835b9f03c4fbb28c414ce9844cabb30aabfb00
2019-07-24 18:26:12 +03:00
Marek Nečada 9c7d69dc5c Get rid of dependency on Moble's quaternions.
Former-commit-id: 182aeda66992aa43c2c172c28a199feba0d6878f
2019-07-21 23:37:25 +03:00
Marek Nečada c0b2343b89 Try whether Triton behaves better if the parallelized code uses no OpenBLAS.
Former-commit-id: ac1c17635e2d01d8a14129a90ffb43d3156510fa
2019-03-29 13:17:28 +02:00
Marek Nečada 6ee4518bb1 Complex Bessel functions using amos.
Not working yet, probably because of unset machine constants in i2mach.f, d1mach.f.


Former-commit-id: 94a15b3bbbcb26b21533866c984076aeefcecb5e
2019-03-20 20:48:01 +02:00
Marek Nečada 2af9b83e35 Move T-matrix -related C code to scatsystem.[ch]
Former-commit-id: e9a162c14fe5d91281d79d9af08014787cd7ed13
2019-03-18 15:04:21 +02:00
Marek Nečada 98da54946c Parallel mode problem matrix creation.
Former-commit-id: a81323f6ba53fc5e790e489314bca98f6ae1ca0a
2019-03-18 01:06:04 +00:00
Marek Nečada 51d38798c3 Some useful ScatteringSystem class functionality.
Former-commit-id: c7ae5dcd3f601b79781b685804dae5262fc2a93d
2019-03-13 22:35:35 +02:00
Marek Nečada a6dcd35b8d Revert setup.py to standard blas names and increment version.
Former-commit-id: e98c7ba026caefd85fd42288fb7e1987c96e5ad1
2019-03-13 16:23:23 +02:00
Marek Nečada d63dd2cae2 Fix projections - work in progress
Former-commit-id: f2f6d3d762fc7c2d728af0cf31c1229ed8db1b1c
2019-03-12 07:01:10 +00:00
Marek Nečada 1d77d76b80 scatsys orbit base generator
Former-commit-id: 098c02bbab329ef54c081eda868fc16eda3c8821
2019-03-07 04:46:19 +00:00
Marek Nečada 04923d0b45 T-matrix reading function fix wrong nesting & other fixes.
Former-commit-id: e0a81510ec618fcc554f5ca9eee0b0a006970414
2019-03-06 21:29:19 +00:00
Marek Nečada 8afa775428 Misc fixes.
Former-commit-id: 36525fd6445d1bd19ffbd803644f8ddaada07be7
2019-03-03 00:30:12 +00:00
Marek Nečada 65605c4680 Add sympy>=1.2 to dependencies
(it has the identity attribute for PermutationGroup; used in
PointGroupInfo)


Former-commit-id: deb63942478d6726e56d20f4ddae6d6831638ed6
2019-03-02 21:59:00 +02:00
Marek Nečada 88b3498cb3 Update setup script and instructions.
Former-commit-id: 9f3031a2e5898b9e81374cd2deae5016bc3b65e7
2019-02-27 10:44:58 +02:00
Marek Nečada 46edafddf7 Restoring the original functionality of zJn with new scipy.
Former-commit-id: ad4f96885390387cb74c36a7b08a58094e3d62e5
2019-02-27 10:26:37 +02:00
Marek Nečada 11cf5b5edc Update setup.py for dependencies
Former-commit-id: e9be513946c8e82032971891062b05e74a97b7f8
2019-02-27 09:45:45 +02:00
Marek Nečada d4ae25ff81 irot3 to uvswf matrix
Former-commit-id: cb59876dbdaae144913422b73a121cb48cfd9984
2019-02-26 00:40:41 +02:00
Marek Nečada efaf3211e4 Quaternion + determinant representation of improper rotations.
Former-commit-id: fbc101d997ae85565584a3f0ea9c583360fbabec
2019-02-25 09:52:23 +02:00
Marek Nečada e120464046 Quaternion power to a real exponent.
Former-commit-id: e8dc72c04813e592dd1c5a0ccff2971374b3c99c
2019-02-25 05:03:11 +00:00
Marek Nečada 8829f50c53 Fix typedef syntax in vectors.h
Former-commit-id: 07ab007347ec17d4840755620bc063ef0ec10523
2019-02-22 06:22:56 +00:00
Marek Nečada 290cfbdd90 Remove py_gmm dependence
Former-commit-id: e73d47f74bc3e7cfe2ffe17d6987171fd3a654a1
2019-02-21 16:05:38 +02:00
Marek Nečada a82b93d140 cdef extern includes to a separate file
Former-commit-id: 8952eea4fc79afbf76ade34a7ac0123b163d8619
2019-02-18 14:42:44 +02:00
Marek Nečada cdb3264a48 Fix names of D3h irreps
Former-commit-id: 8ba62e17ce473b8d5333f5f2fc762b369fe12b6f
2018-09-26 01:17:01 +00:00
Marek Nečada 726e5615af Wdata python processing and loading
Former-commit-id: 7c93e51efc4df0410e34c1a1770192581bf17190
2018-09-19 19:23:10 +03:00
Marek Nečada 1cc1793f57 Fix memory corruption, python package installability
Former-commit-id: d9d89ff20b67132e8d88d55b206a8856a395f1f2
2018-05-15 14:37:05 +03:00
Marek Nečada 90cc4065d3 Bessel transform mathematica results etc.
Former-commit-id: 3dca9d0ccbfefa4c5f3867ce4ba31229646ca2d9
2018-01-15 15:14:15 +02:00
Marek Nečada 3ab9221519 Another fatal type
Former-commit-id: 6a4fbab576c3315feeb345ded0f6e4eb4c8e1c0d
2017-05-18 16:57:16 +03:00
Marek Nečada add6f1111b Fatal / forgotten imaginary unit
Former-commit-id: b68b6dbee3fcdc57a2a772d5beac82584725ed59
2017-05-18 09:01:35 +03:00
Marek Nečada 43702a00c8 Cosmetics
Former-commit-id: f7a02a39ae67af4fb835892be4ff8356f3e91c9d
2017-05-17 13:34:54 +03:00
Marek Nečada 3479a30e9b Skript pro konečné čtvercové matice; segfaultuje.
Former-commit-id: ce5df9e399a561273d5d0f9cbfe004543d991958
2017-05-16 16:14:25 +03:00
Marek Nečada 1fa2e70d93 Fix vectorized implementation of ...getSVD
Former-commit-id: 09bdc607b096859d9679d39d5e08ea71669d3673
2017-05-11 06:31:43 +03:00
Marek Nečada 4b614d8e0b Vectorization of python ...getSVD version
Former-commit-id: 47b491c768dd30c86055cbb36ab0f7748a8a5202
2017-05-11 04:38:46 +03:00
Marek Nečada 36ed59dcf8 Update setup script and plotting cosmetics
Former-commit-id: 4929c28524809d1e9ffb42f523e99ee4e43d4fb8
2017-05-08 19:45:16 +03:00
Marek Nečada 205c1316f3 Fix python header include etc
Former-commit-id: f14e9673df8781be76d86df81394aacee7f557db
2017-05-03 08:43:29 +03:00
Marek Nečada 975e4c7162 fix of fix of setup file
Former-commit-id: 8cbc9437afabd2ff2c71f1c87a39c57748abd941
2017-05-03 08:32:06 +03:00
Marek Nečada 8815708e11 Fix setup script
Former-commit-id: 4bdcd71e2aaea284eccc4d85bc128110d16c5220
2017-05-03 08:30:05 +03:00
Marek Nečada e2a2100b57 lattices.py using now the c module
Former-commit-id: 52cecb23a8757726bcac796417ebade8242d687a
2017-04-27 13:12:52 +03:00