Kristian Arjas
24a6ea01d7
Include vlen in the solver (yet another regression from 087cd1c
)
2021-09-21 09:59:26 +03:00
Kristian Arjas
50a5aa11a6
Add residual to solver (fix regression from 087cd1c
)
2021-09-15 16:46:13 +03:00
Marek Nečada
572e15edbb
Merge branch 'python_tmg': T-matrix generators from python functions
2021-08-23 08:42:50 +03:00
Marek Nečada
b12fc991e5
Custom python T-matrix generator test.
2021-08-23 08:39:27 +03:00
Marek Nečada
a5b137847a
Custom python T-matrix generators
2021-08-22 09:01:16 +03:00
Marek Nečada
314cde1b99
BaseSpec "constructor" from C pointer.
2021-08-21 19:05:49 +03:00
Marek Nečada
80ee8b0d53
setup.py improvements
...
- resolve numpy header location using numpy.get_include()
- a hack to install cython, numpy before calling setup()
(needed for cythonize() and get_include()) if necessary
- use named lists to reduce repetitions
- remove gslcblas from linker dependencies
- remove some old, commented out stuff
2021-08-08 08:02:06 +03:00
Marek Nečada
087cd1cab3
Merge branch 'beyn_pureblas'
...
Getting rid of gsl_matrix and gsl_cblas dependencies in the
implementation of Beyn's algorithm. This avoids header clashes between
gsl_cblas.h and cblas.h.
2021-06-11 11:12:42 +03:00
Marek Nečada
9d556e7b23
Remove all gsl_matrix_... related code in Beyn.
...
Now that pure BLAS implementation is working, this in no longer needed.
Getting rid of gsl_matrix and gsl_cblas eliminates header clashes between
GSL and other CBLAS implementations.
2021-06-11 11:11:17 +03:00
Marek Nečada
f19c590d6e
Pure BLAS Beyn: cleanup commented out GSL code
2021-06-11 11:11:17 +03:00
Marek Nečada
2be3521333
beyn pure BLAS: fix indices and strides
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Also fix amos reference in CMakeLists
2021-06-11 11:11:17 +03:00
Marek Nečada
64f77557a7
[WIP;BROKEN] Getting rid of gsl linear algebra in Beyn.
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Segfaults in LAPACKE_zgesdd.
Former-commit-id: 39ce2f70e214bfe2fba6f1ec2960139194dbc761
2021-06-11 11:11:17 +03:00
Marek Nečada
7e0d7639e8
Fix tests/CMakeLists amos reference
2021-06-09 13:28:18 +03:00
Marek Nečada
36c5d5236a
Fix CQuat.from_rotvector()
2021-02-08 08:47:40 +02:00
Marek Nečada
cf2aca7f03
Silent NAN (with warning) instead of crash for singular Bessel at zero
2020-11-17 10:57:16 +02:00
Marek Nečada
3479721455
Workaround for crashing spherical Bessel funcs at large distance.
...
This leads to loss of precision nevertheless, but it should
not be critical, especially if the main use is in far field patterns.
2020-09-02 12:15:26 +03:00
Marek Nečada
6189918348
finiterect-constants-driving always output the actual ccd_size
2020-09-02 09:30:23 +03:00
Marek Nečada
031397aacd
finiterectlat-modes.py fix filename pattern
2020-08-03 17:58:50 +03:00
Marek Nečada
1a4b279eff
Add D2h/D4h choice for square lattices in finiterectlat-modes.py
2020-08-03 14:50:33 +03:00
Marek Nečada
5285210489
Fix/update finiterectlat-modes.py
2020-08-03 14:36:06 +03:00
Marek Nečada
ae62cf903d
C99 standard compliance for static const initialisers.
2020-07-23 14:18:07 +03:00
Marek Nečada
5246229b2d
Code reuse
2020-07-23 10:00:39 +03:00
Marek Nečada
868e603f1c
Infinite periodic system scattered field "bases"
2020-07-23 07:23:47 +03:00
Marek Nečada
bf297c11c3
Alternative approach in recursive "Delta" to avoid overflows.
2020-07-21 05:07:23 +03:00
Marek Nečada
9e42520371
Docstrings, array dtypes, fix _sswk "constructor"
2020-07-20 12:29:37 +03:00
Marek Nečada
a68e1d8f8c
Fix Ag Drude-Lorentz parameters also in the Python version.
2020-07-08 19:37:13 +03:00
Kristian Arjas
a669e661e3
Fix Drude Parameters
2020-07-08 16:00:33 +03:00
Kristian Arjas
d19a7813f7
Update gitignore
2020-07-08 15:58:42 +03:00
Marek Nečada
07c2f678b2
Fix finite <-> infinite error
2020-07-04 01:50:00 +03:00
Marek Nečada
38fca209ef
Some features to enable ScatteringSystem reconstruction
2020-07-03 23:04:53 +03:00
Marek Nečada
24b5371e18
Remove erroneus "assert"
2020-07-03 20:08:49 +03:00
Marek Nečada
840744ec97
Provide access to more information in ScatteringSystem
2020-07-03 19:11:06 +03:00
Marek Nečada
38a4dbfcd7
Set compiler/linker options to make cython parallelisation actually work.
2020-07-03 15:10:15 +03:00
Marek Nečada
17824b062e
Attempt to parallelize scattered_E cython methods.
2020-07-03 14:20:07 +03:00
Marek Nečada
1328077490
Ewald sum optimisation
...
Avoiding repeated cpow() calls yields more than 5x speedup
in the off-plane case.
2020-07-03 11:46:34 +03:00
Marek Nečada
f7883a713b
Docs: Add overview of CLI utilities; optimisation TODO
2020-07-02 22:49:12 +03:00
Marek Nečada
93118cfc07
[cleanup] Great purge of obsolete scripts
...
Some of the purged scripts might be desirable
to reimplement using the new API, especially
those related to hexagonal lattices.
2020-07-02 22:29:39 +03:00
Marek Nečada
fc27320988
[cleanup] Remove obsolete CLI scripts
2020-06-30 19:29:14 +03:00
Marek Nečada
676240cf0d
Update MathJax CDN address.
2020-06-29 12:36:07 +03:00
Marek Nečada
7d92f4990b
Cleanup of legacy files.
2020-06-29 09:29:40 +03:00
Marek Nečada
e0861a7d40
Doxygen annotations of header files.
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Also more politically corrent file name.
2020-06-29 09:14:19 +03:00
Marek Nečada
87c2b08701
Update README, remove obsolete periodic lattice tutorial
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Former-commit-id: b720e30291768b564b73823c5741fe59ab46ed57
2020-06-26 22:40:00 +03:00
Marek Nečada
6c79a9116b
Mention submodule in README
...
Former-commit-id: 010fe7beb14bef1e56be720e2196716baebc5998
2020-06-23 15:30:21 +03:00
Marek Nečada
884baca199
Add license
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Former-commit-id: 08424eb61c2af81d2bf7e782ab63dded93c40b32
2020-06-23 15:23:20 +03:00
Marek Nečada
e0e572db3c
Update features in README.md
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Former-commit-id: bb142ce1812d0d9330f8e60286820aaf105c505a
2020-06-23 15:16:23 +03:00
Marek Nečada
42497939c1
Scattering example ipynb
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Former-commit-id: 9a642c465092fc90fd683f360afa45e978ca8afe
2020-06-23 14:53:29 +03:00
Marek Nečada
cc8d2644bf
size_vs_lMax plot script as in the paper
...
Former-commit-id: db19f07b9e2c2f92cab16dc2ecd72518e55ce19e
2020-06-23 08:38:07 +03:00
Marek Nečada
14e415dfc5
Add the size vs. lMax script from triton.
...
Former-commit-id: b2670f5fb1c54242dd670a4e71eb018a85e2ea6c
2020-06-23 08:13:52 +03:00
Marek Nečada
7f2e36e956
Square lattice example mode plot
...
Former-commit-id: a07106cf57e2d2d7c2c9c19712fc4affbdad3419
2020-06-23 05:48:28 +03:00
Marek Nečada
eba5784042
Ewald 1,2D in 3D fix K -> k + K
...
Former-commit-id: 65f29d42014d7150894e9c9a2bf1c7b71a90172b
2020-06-22 16:36:42 +03:00