Commit Graph

1177 Commits

Author SHA1 Message Date
Marek Nečada 92842d4e75 Nicer BaseSpec.__repr__() for BaseSpec(lMax=...) 2022-05-25 19:16:22 +03:00
Marek Nečada b9d89fb346 BaseSpec.__repr__() 2022-05-25 07:35:40 +03:00
Marek Nečada 4df51c3986 BaseSpec constructor docs 2022-05-25 06:09:31 +03:00
Marek Nečada 0551004d4d Comments, doxygen
Remove old (not valid anymore) comments from vswf.h

Doxygenise translations_dbg.h
2022-04-24 22:30:46 +03:00
Marek Nečada cae211e426 Merge branch 'catch_test' into ewald_dbg_rebased2 2022-04-24 22:26:44 +03:00
Marek Nečada 16a0a7dc0a Dummy (zero) T-matrix generator 2022-04-04 09:43:02 +03:00
Marek Nečada 3052895ac6 VSWF fill test, fix memory issue 2022-03-30 14:03:49 +03:00
Marek Nečada 9e788b9d2f Missing include 2022-03-30 13:07:27 +03:00
Marek Nečada 923e1e0a77 Indexing.h C++ compatibility; flag C++ incompatible headers. 2022-03-30 11:15:18 +03:00
Marek Nečada 856903a98b Restructure headers to ensure ewald.h C++ compatibility 2022-03-30 10:58:07 +03:00
Marek Nečada 89f7400c71 vectors.h explicit type conversions for C++ compatibility 2022-03-30 09:59:04 +03:00
Marek Nečada 6820eb3366 extern "C" in headers 2022-03-30 09:47:06 +03:00
Marek Nečada e66f95aa4f Introduce testing witch catch2 (no runtime tests yet) 2022-03-30 09:31:25 +03:00
Marek Nečada b04a4deebe Replace "complex" with "_Complex" in headers
Needed for compatibility with C++ (in which "complex" is
a template).
2022-03-30 09:06:47 +03:00
Marek Nečada 736adb6974 Expressing VSWF in terms of SSWF 2022-03-29 14:57:02 +03:00
Marek Nečada 10d3beca1c Indexing documentation, pedantic use of qpms_y_sc_t 2022-03-25 21:53:45 +02:00
Marek Nečada f9081c5922 Remove duplicit function declaration.
qpms_scatsysw_scattered_field_basis()
2022-03-25 16:10:24 +02:00
Marek Nečada 54936ee722 analysis: fix symmetry group info 2022-01-03 23:51:13 +02:00
Marek Nečada 63f7f216b0 Analysis script also for finiterectlat constant driving results 2022-01-03 20:58:01 +02:00
Marek Nečada 0315481977 Expose more testing functions via cython api. 2021-12-21 12:42:23 +02:00
Marek Nečada dca04153f2 Fix unitialised diagonal blocks in full modeproblem matrix.
The bug in qpms_scatsysw_build_modeproblem_matrix_full()
via qpms_scatsysw_scatsyswk_build_modeproblem_matrix_full()
affected finite-size arrays: instead of filling the diagonal
interaction blocks with zeros, they were filled with undefined
values from a superfluous zgemm() call.
2021-12-21 11:29:44 +02:00
Marek Nečada d40f1fd004 analysis.py: fix duplicities in position mapping due to rounding errors 2021-12-09 14:53:57 +02:00
Marek Nečada dd0ee9e2d4 Helper class to analyse results of finiterectlat-modes.py 2021-12-09 14:22:46 +02:00
Marek Nečada 0a7e591aa3 WIP fixing some example scripts 2021-12-09 11:18:14 +02:00
Marek Nečada d600977ca5 Move old cython translation_calculator wrapper 2021-12-09 11:18:14 +02:00
Marek Nečada f283bc01d1 Attempt to fix the Ewald sum SSWF phase bug 2021-12-09 11:18:14 +02:00
Marek Nečada b088464e3e Revert scatsystem cython parallelisation.
It didn't work correctly on my laptop.
This must be reviewed later, as the waiting is annoying.
2021-12-08 14:18:32 +02:00
Marek Nečada 227aaf4021 Dirty fix of the otherwise non-literal arrays. 2021-12-08 14:09:15 +02:00
Marek Nečada 0078f4db56 Cython evaluation of "normal" and Ewald-summed SSWF 2021-12-08 14:09:15 +02:00
Marek Nečada 210ddaa527 ScatteringSystem, ... definitions to pxd file 2021-12-08 14:09:15 +02:00
Marek Nečada c4d0700aca SSWF evaluation functions for debugging Ewald sum. 2021-12-08 14:09:15 +02:00
Marek Nečada 86d5245ea1 Additional phase factors in Ewald sum for debugging 2021-12-08 14:09:15 +02:00
Marek Nečada afda889a39 WIP documentation on phase/normalisation implementation. 2021-12-08 14:09:15 +02:00
Marek Nečada 8069634930 Ewald summation consistency test for lattice basis fields.
In-plane test currently passes, out-of-plane does not.
2021-12-08 14:09:15 +02:00
Marek Nečada a7c70344c5 finiterect-constant-driving more metadata output 2021-12-08 14:09:15 +02:00
Marek Nečada c0ade8cf2b Remove bugs of removed code from BUGS.rst.
Some of the other bugs might have been already fixed
as well, this has to be reviewed, and also doxygenised.
2021-12-08 14:09:15 +02:00
Marek Nečada fa6d93d3e8 Enable separation of long- and short-range of Ewald sum in python 2021-12-08 14:09:15 +02:00
Marek Nečada 7e390180cd Fix prange race conditions. 2021-12-08 14:09:15 +02:00
Marek Nečada 1158e116d2 "Basis fields" for finite systems.
There seem to be race conditions in the prange'd cython parts.
2021-12-08 14:09:15 +02:00
Marek Nečada 414bee6c9f "Basis fields" for finite systems 2021-12-08 14:09:15 +02:00
Kristian Arjas 24a6ea01d7 Include vlen in the solver (yet another regression from 087cd1c) 2021-09-21 09:59:26 +03:00
Kristian Arjas 50a5aa11a6 Add residual to solver (fix regression from 087cd1c) 2021-09-15 16:46:13 +03:00
Marek Nečada 572e15edbb Merge branch 'python_tmg': T-matrix generators from python functions 2021-08-23 08:42:50 +03:00
Marek Nečada b12fc991e5 Custom python T-matrix generator test. 2021-08-23 08:39:27 +03:00
Marek Nečada a5b137847a Custom python T-matrix generators 2021-08-22 09:01:16 +03:00
Marek Nečada 314cde1b99 BaseSpec "constructor" from C pointer. 2021-08-21 19:05:49 +03:00
Marek Nečada 80ee8b0d53 setup.py improvements
- resolve numpy header location using numpy.get_include()
- a hack to install cython, numpy before calling setup()
  (needed for cythonize() and get_include()) if necessary
- use named lists to reduce repetitions
- remove gslcblas from linker dependencies
- remove some old, commented out stuff
2021-08-08 08:02:06 +03:00
Marek Nečada 087cd1cab3 Merge branch 'beyn_pureblas'
Getting rid of gsl_matrix and gsl_cblas dependencies in the
implementation of Beyn's algorithm. This avoids header clashes between
gsl_cblas.h and cblas.h.
2021-06-11 11:12:42 +03:00
Marek Nečada 9d556e7b23 Remove all gsl_matrix_... related code in Beyn.
Now that pure BLAS implementation is working, this in no longer needed.

Getting rid of gsl_matrix and gsl_cblas eliminates header clashes between
GSL and other CBLAS implementations.
2021-06-11 11:11:17 +03:00
Marek Nečada f19c590d6e Pure BLAS Beyn: cleanup commented out GSL code 2021-06-11 11:11:17 +03:00